For my wiring needs I worked on my own harness. I followed the write up on LT1swap.com. Most of the info is on there. I did get the rest on here but honestly I don't remember anymore. I know Randyzzz helped but beyond that

sorry guys
Now that I have it running and driving, I can definitely tell you what works and what doesn't with clutch master and slaves. When the master is bigger than the slave the pedal is stiffer with a short travel distance to disengage. When the master is smaller you have an easier pedal, but the travel distance is longer. First I tried a factory cj clutch master cylinder which is a 13/16 bore. The pedal is way too stiff. This doesn't work at all unless you are Hercules. Then I tried using Novaks recommendation to use a master from an 87-90 yj which is a 11/16 bore. The pedal went to the floor and wouldn't even disengage the clutch. The factory cj clutch pedal is lower than the brake pedal. So I cut and rewelded the pedal so they are both the same height. I did not want it higher than the brake pedal.
Before
After
The pedal was much easier to push, but it would disengage the clutch JUST off the floor. I had to take out my floor mat to drive it. I didn't like this at all so I bought a universal Wilwood master that was a 3/4 bore.
This worked really well but the pedal got stiffer again. A bit too much for my liking. So the clutch was to blame. This is what Novak and Advance Adapters told me. They told me it wouldn't work and damn near laughed at me for even trying it. So I took the kick in the nuts and bought the $350 custom flywheel they told me I just had to have. Got a Gen 1 11inch clutch again and changed everything over. Only to find out..........it barely made a difference!!!

I was so pissed. If I knew that I would've just left it. I was done dealing with it and decided I just needed to get used to it. Now after driving it all summer, it's really not that bad. I like the travel distance and the stiffer feel doesn't bother me as much anymore.